PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26666
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 131aa    MW: 14046.1 Da    PI: 7.443
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26666genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.84e-111452145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     rg+W+ eEd +l   v+    + W++Ia++++ gRt++++k++w 
         EMT26666 14 RGAWSREEDAILTTFVA----R-WSAIAAKLP-GRTDNDVKNHWS 52
                     89**********99997....6.*********.***********6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-16558IPR009057Homeodomain-like
SuperFamilySSF466895.46E-13660IPR009057Homeodomain-like
PROSITE profilePS5129417.043959IPR017930Myb domain
SMARTSM007173.2E-81357IPR001005SANT/Myb domain
PfamPF002494.3E-91452IPR001005SANT/Myb domain
CDDcd001676.62E-111655No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MGKSPCCDKA RVKRGAWSRE EDAILTTFVA RWSAIAAKLP GRTDNDVKNH WSTKLKKRHV  60
MLMSTAAAPS TPPTGVAPPA TPPPALVDLE AALATVDDGG ELTCEAEQLY AELMGLIEQQ  120
PTGHGQQRSL L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703064e-31HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014754128.14e-33PREDICTED: LOW QUALITY PROTEIN: transcription factor RAX2-like
TrEMBLM8CSI65e-93M8CSI6_AEGTA; Transcription factor RAX1
STRINGOB01G38240.11e-21(Oryza brachyantha)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.14e-15myb domain protein 36